dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002082_11|CGC1
Gene ID: MGYG000002082_01590
Location and strand information: 1139 - 4558 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.7639
Protein molecular weight: 130061.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002082_11|CGC1
Gene ID: MGYG000002082_01591
Location and strand information: 4584 - 8522 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002082_11|CGC1
Gene ID: MGYG000002082_01592
Location and strand information: 8715 - 10376 (+)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3836
Protein molecular weight: 62386.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002082_11|CGC1
Gene ID: MGYG000002082_01593
Location and strand information: 10496 - 13663 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002082_11|CGC1
Gene ID: MGYG000002082_01594
Location and strand information: 13677 - 15497 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002082_11|CGC1
Gene ID: MGYG000002082_01595
Location and strand information: 15528 - 18503 (+)
Family: 1.B.14.6.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002082_11|CGC1
Gene ID: MGYG000002082_01596
Location and strand information: 18515 - 20146 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002082_11|CGC1
Gene ID: MGYG000002082_01597
Location and strand information: 20217 - 21098 (+)
Family: null
Protein type: null
Protein description: Keratan-sulfate endo-1,4-beta-galactosidase

Gene clsuter ID: MGYG000002082_11|CGC1
Gene ID: MGYG000002082_01598
Location and strand information: 21131 - 22627 (+)
Family: CBM32|GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.058
Protein molecular weight: 56097.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002082_11|CGC1
Gene ID: MGYG000002082_01599
Location and strand information: 22648 - 24405 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002082_11|CGC1
Gene ID: MGYG000002082_01600
Location and strand information: 24479 - 25252 (+)
Family: GH16_3
Protein type: CAZyme
Protein description: Keratan-sulfate endo-1,4-beta-galactosidase
Protein isoelectric point: 4.8942
Protein molecular weight: 29908.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is mucin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002082_01590	Beta-galactosidase	CAZyme	1139	4558	-	GH2
MGYG000002082_01591	Sensor histidine kinase RcsC	TF	4584	8522	-	HTH_AraC
MGYG000002082_01592	hypothetical protein	CAZyme	8715	10376	+	GH20
MGYG000002082_01593	hypothetical protein	TC	10496	13663	+	1.B.14.6.1
MGYG000002082_01594	hypothetical protein	null	13677	15497	+	SusD-like_3\| SusD_RagB
MGYG000002082_01595	hypothetical protein	TC	15528	18503	+	1.B.14.6.2
MGYG000002082_01596	hypothetical protein	null	18515	20146	+	SusD-like_3\| SusD_RagB
MGYG000002082_01597	Keratan-sulfate endo-1,4-beta-galactosidase	null	20217	21098	+	Glyco_hydro_16
MGYG000002082_01598	hypothetical protein	CAZyme	21131	22627	+	CBM32\| GH29
MGYG000002082_01599	hypothetical protein	null	22648	24405	+	BACON\| Laminin_G_3
MGYG000002082_01600	Keratan-sulfate endo-1,4-beta-galactosidase	CAZyme	24479	25252	+	GH16_3
Protein ID	Protein Name	Type	Start	End	Strand	Signature